CoexViewer
Coexpression detail for PME1 and MES7
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | PME1 | pectin methylesterase inhibitor 1 | 826848 | At4g12390 | 0.61 | 3.19 | 2.74 | 2.78 | 3088.10 | 2.52 | 1.70 | -0.42 | 0.15 | -0.38 | 0.15 | |
| ath | MES7 | methyl esterase 7 | 816888 | At2g23560 | 0.61 |
|
coex z = 2.7372 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 826848 (z-scored expression) |
816888 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 25.3 | -5.7 | -4.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 22.1 | -4.9 | -4.5 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 22.1 | -5.0 | -4.4 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 20.7 | 6.3 | 3.3 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 20.7 | 6.3 | 3.3 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 18.4 | 5.0 | 3.7 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.3 | -3.7 | -4.5 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 16.3 | -4.6 | -3.5 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 14.6 | -3.6 | -4.0 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 14.4 | 4.5 | 3.2 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.4 | -3.0 | -4.9 | SRP151348 | SRR7429877 | Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity |
| 13.3 | -3.9 | -3.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 12.9 | -3.8 | -3.4 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 12.6 | 3.6 | 3.5 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | 3.7 | 3.4 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.4 | -4.6 | -2.7 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 11.9 | -5.3 | -2.2 | SRP371011 | SRR18808231 | Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation |
| 11.8 | -3.6 | -3.2 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 11.6 | -2.3 | -5.0 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.5 | -3.2 | -3.6 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.3 | 4.1 | 2.8 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.3 | -3.3 | -3.4 | SRP017386 | SRR627679 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 11.2 | 3.6 | 3.1 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.1 | -3.4 | -3.2 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 10.9 | -3.5 | -3.1 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.9 | -2.5 | -4.3 | SRP073487 | SRR3401835 | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
| 10.6 | -3.3 | -3.2 | SRP156316 | SRR7642979 | From gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots. |
| 10.6 | -2.2 | -4.7 | SRP238608 | SRR10760446 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 10.6 | -2.7 | -4.0 | SRP201971 | SRR9331189 | RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types |
| 10.3 | -3.5 | -2.9 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | -3.5 | -2.9 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | -3.4 | -3.0 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.1 | 3.8 | 2.6 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
The preparation time of this page was 0.8 [sec].
