CoexViewer
Coexpression detail for PME1 and AT3G06145
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | PME1 | pectin methylesterase inhibitor 1 | 826848 | At4g12390 | 0.61 | 4.37 | 4.70 | 2.70 | |
| ath | AT3G06145 | RING zinc finger protein | 819788 | At3g06145 | 0.61 |
|
coex z = 4.6993 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 826848 (z-scored expression) |
819788 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 38.9 | 6.3 | 6.1 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 21.9 | 5.0 | 4.4 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 21.5 | -4.6 | -4.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 20.3 | -5.7 | -3.6 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 16.9 | -3.2 | -5.3 | SRP114806 | SRR5894775 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 15.9 | -3.2 | -5.0 | SRP091641 | SRR4426582 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 15.9 | -3.2 | -5.0 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 15.1 | 4.5 | 3.4 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.8 | -3.8 | -3.9 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 14.4 | -3.8 | -3.8 | SRP018034 | SRR2079784 | Time-course transcriptome of wild-type Arabidopsis leaf |
| 14.3 | 4.1 | 3.5 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.2 | -3.6 | -3.9 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 13.9 | -3.9 | -3.6 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 13.9 | -4.6 | -3.0 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 13.8 | -3.5 | -3.9 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.7 | -5.0 | -2.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 13.1 | 3.6 | 3.6 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | -4.9 | -2.5 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 12.4 | -5.3 | -2.3 | SRP371011 | SRR18808231 | Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation |
| 12.2 | 3.3 | 3.7 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | -3.7 | -3.3 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 11.9 | -3.4 | -3.5 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 11.3 | 3.6 | 3.1 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.3 | -3.7 | -3.1 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.3 | 3.8 | 3.0 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.8 | -3.5 | -3.1 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.4 | -3.2 | -3.2 | SRP150217 | SRR7289585 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | -4.2 | -2.5 | SRP097877 | SRR5205781 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.1 | -2.8 | -3.6 | SRP166137 | SRR8078941 | RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana) |
The preparation time of this page was 0.7 [sec].
