CoexViewer
Coexpression detail for NUDT7 and TCH3
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | NUDT7 | MutT/nudix family protein | 826884 | At4g12720 | 0.85 | 13.06 | 10.54 | 12.05 | 6.00 | 4.94 | 4.35 | 4.47 | 5.18 | 3.99 | 6.84 | |
| ath | TCH3 | Calcium-binding EF hand family protein | 818709 | At2g41100 | 0.85 |
|
coex z = 10.5357 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 826884 (z-scored expression) |
818709 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 23.8 | -4.7 | -5.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 21.6 | 4.9 | 4.4 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 17.5 | 4.1 | 4.3 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 17.3 | -4.0 | -4.3 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 15.1 | -4.6 | -3.3 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 12.4 | 3.8 | 3.2 | SRP222555 | SRR10148650 | Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana |
| 12.3 | 4.0 | 3.1 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | -4.2 | -2.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 11.8 | -2.4 | -4.9 | SRP007484 | SRR309176 | Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions |
| 11.7 | 4.3 | 2.8 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.3 | -2.9 | -3.9 | SRP100064 | SRR5262979 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.2 | 3.4 | 3.3 | SRP101641 | SRR5330630 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.4 | 3.2 | 3.3 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.4 | 2.5 | 4.1 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.3 | -3.4 | -3.0 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.1 | -2.1 | -4.7 | SRP100712 | SRR5285778 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.0 | -3.4 | -3.0 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
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