CoexViewer

Coexpression detail for NYC1 and ABCI8
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath NYC1 NAD(P)-binding Rossmann-fold superfamily protein 826942 At4g13250 0.89 8.37 7.38 7.11 34.20 2.77 2.57 4.13 2.22 -1.11 16.67
ath ABCI8 ATP binding cassette protein 1 825814 At4g04770 0.89
Platform:

coex z = 7.3764



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 826942
(z-scored expression)		 825814
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
45.0 -7.9 -5.7 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
36.8 -5.9 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.6 -6.2 -4.9 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
29.0 -5.5 -5.3 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
28.0 -5.0 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
25.8 -4.6 -5.6 SRP114806 SRR5894651 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
22.0 -4.4 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.8 -4.3 -5.0 SRP114806 SRR5894640 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
20.8 -4.3 -4.9 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
20.8 -4.6 -4.5 SRP098906 SRR5231017 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
20.7 -4.6 -4.5 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.4 -4.6 -4.2 SRP277946 SRR12469770 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
18.3 -4.3 -4.3 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.2 -3.2 -5.4 SRP277946 SRR12469641 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.6 -4.2 -4.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.3 -4.0 -4.1 SRP114806 SRR5894631 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.9 3.6 4.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.8 -6.5 -2.4 SRP267137 SRR12005766 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
15.5 -3.8 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.0 -3.9 -3.8 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
14.6 -3.5 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.2 -3.8 -3.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
13.6 -3.9 -3.5 SRP301115 SRR13397392 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
13.5 -4.0 -3.4 SRP301115 SRR13397393 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
13.0 -3.1 -4.2 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
12.4 -3.7 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.4 -3.7 -3.4 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.4 -3.2 -3.8 SRP114806 SRR5894649 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.1 -3.7 -3.3 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.7 3.2 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.7 3.3 3.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.7 -4.1 -2.9 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 -3.5 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.5 -2.8 -4.1 SRP114806 SRR5894650 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 -2.9 -4.0 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -3.0 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.0 -2.7 -4.1 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.9 -3.1 -3.5 SRP102178 SRR5360849 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 3.1 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.6 -3.0 SRP277946 SRR12469704 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 -2.4 -4.4 SRP114806 SRR5894639 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 3.1 3.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.5 -3.8 -2.8 SRP173235 SRR8310077 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
10.5 -3.3 -3.2 SRP100938 SRR5304681 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.5 -3.1 -3.4 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.6 -2.9 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.4 -4.0 -2.6 SRP229078 SRR10416654 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
10.2 -4.2 -2.5 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.2 -3.8 -2.7 SRP173235 SRR8310087 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
10.1 -4.4 -2.3 SRP277946 SRR12469703 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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