CoexViewer
Coexpression detail for CYP83A1 and IPMI2
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ath | CYP83A1 | cytochrome P450, family 83, subfamily A, polypeptide 1 | 827011 | At4g13770 | 0.91 | 22.88 | 19.30 | 20.27 | 1.00 | 5.05 | 5.12 | 5.49 | 4.69 | -0.44 | 18.05 | |
ath | IPMI2 | isopropylmalate isomerase 2 | 818912 | At2g43100 | 0.91 |
coex z = 19.2986 |
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Sample contribution score* | 827011 (z-scored expression) |
818912 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
---|---|---|---|---|---|
31.0 | -5.7 | -5.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
22.6 | -4.8 | -4.7 | SRP191093 | SRR8859577 | RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes. |
17.7 | -2.7 | -6.5 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
14.4 | -3.8 | -3.8 | SRP365283 | SRR18430924 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
14.3 | -3.8 | -3.8 | SRP035269 | SRR1105582 | RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids |
14.0 | 3.7 | 3.8 | SRP097877 | SRR5205630 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
13.7 | -3.5 | -4.0 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
13.3 | -3.5 | -3.8 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
12.8 | -3.0 | -4.2 | ERP116123 | ERR3414875 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
12.2 | -3.6 | -3.4 | SRP277946 | SRR12470035 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
12.1 | -3.2 | -3.8 | SRP090459 | SRR4296015 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
11.6 | -3.4 | -3.4 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
11.0 | -3.6 | -3.1 | SRP282437 | SRR12642105 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
10.4 | -3.3 | -3.2 | SRP277946 | SRR12470034 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
10.2 | -3.2 | -3.2 | SRP091641 | SRR4426368 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
10.2 | -3.6 | -2.8 | SRP282437 | SRR12642104 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
10.0 | -3.8 | -2.6 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
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