CoexViewer

Coexpression detail for AT4G15630 and AT1G55260
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G15630 Uncharacterized protein family (UPF0497) 827240 At4g15630 0.64 6.27 6.01 4.82 44.00 0.82 4.30 3.87 2.12 1.81 3.78
ath AT1G55260 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 841970 At1g55260 0.64
Platform:

coex z = 6.0129



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 827240
(z-scored expression)		 841970
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
36.1 -6.0 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.8 5.4 5.3 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
26.5 -5.2 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
23.8 5.1 4.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
23.5 5.0 4.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
23.1 4.9 4.7 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
20.5 -5.1 -4.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.9 4.4 4.3 SRP114806 SRR5894445 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.3 -4.0 -4.1 SRP229078 SRR10416656 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
15.4 4.5 3.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
13.0 4.2 3.1 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.6 -4.0 -3.1 SRP277946 SRR12470099 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 -5.3 -2.4 SRP100712 SRR5285543 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.2 -3.6 -3.4 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.0 -3.7 -3.2 SRP199288 SRR9113157 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
12.0 3.4 3.5 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 -3.6 -3.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.9 -4.7 -2.5 SRP090458 SRR4295831 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.9 3.9 3.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 3.5 3.3 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 3.7 3.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -4.0 -2.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
11.2 -2.2 -5.2 SRP091641 SRR4426511 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 3.5 3.2 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -5.3 -2.1 SRP100938 SRR5304443 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.9 3.4 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.9 -2.1 -5.2 SRP091641 SRR4426531 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 -3.1 -3.5 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.6 -3.5 -3.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.6 -3.8 -2.8 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.5 -2.5 -4.2 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 2.8 3.6 SRP100064 SRR5263188 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.1 -3.4 -3.0 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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