CoexViewer
Coexpression detail for AT4G15830 and CYCA1;1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G15830 | ARM repeat superfamily protein | 827264 | At4g15830 | 0.28 | 13.91 | 12.13 | 11.93 | 3.20 | 4.50 | 4.98 | 4.53 | 3.15 | 4.20 | 8.93 | |
| ath | CYCA1;1 | Cyclin A1;1 | 841014 | At1g44110 | 0.28 |
|
coex z = 12.132 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 827264 (z-scored expression) |
841014 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 50.4 | -5.9 | -8.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 19.4 | -4.7 | -4.1 | SRP103817 | SRR5444473 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 17.9 | -3.8 | -4.7 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 17.9 | -2.2 | -8.0 | SRP214585 | SRR9681424 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 14.6 | -3.9 | -3.7 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.4 | -4.0 | -3.6 | SRP050945 | SRR1696837 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 14.3 | -3.6 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 12.9 | -3.9 | -3.3 | SRP187381 | SRR8662042 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 12.7 | -2.7 | -4.8 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.7 | -3.1 | -4.1 | ERP115370 | ERR3333441 | Arabidopsis tissue atlas |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426346 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426941 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426952 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426347 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426353 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426421 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426502 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426434 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.6 | -3.6 | -3.5 | SRP091641 | SRR4426582 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.1 | -3.4 | -3.6 | SRP044776 | SRR1523938 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 12.1 | -3.7 | -3.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 11.6 | -3.6 | -3.2 | SRP052276 | SRR1760174 | Arabidopsis thaliana Transcriptome or Gene expression |
| 11.6 | -3.5 | -3.3 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.5 | -3.6 | -3.2 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.5 | -3.5 | -3.3 | SRP151348 | SRR7429875 | Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity |
| 11.4 | -3.1 | -3.7 | SRP187381 | SRR8662040 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 11.2 | -2.7 | -4.1 | ERP115370 | ERR3333442 | Arabidopsis tissue atlas |
| 11.1 | -2.4 | -4.6 | SRP126574 | SRR6369488 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 10.7 | -2.9 | -3.8 | SRP074485 | SRR3480182 | Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth |
| 10.5 | -3.0 | -3.5 | SRP285902 | SRR12747511 | Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis |
| 10.5 | 3.4 | 3.1 | SRP169564 | SRR8206426 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 10.3 | -2.2 | -4.7 | SRP073485 | SRR3401785 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.3 | -2.5 | -4.1 | SRP100712 | SRR5285701 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.3 | -3.3 | -3.1 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 10.2 | -3.5 | -2.9 | SRP083970 | SRR4115297 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 10.2 | -3.0 | -3.4 | SRP218723 | SRR9995082 | Plant 22-nt siRNAs mediate translational repression and stress adaptation |
| 10.1 | -3.5 | -2.9 | SRP238608 | SRR10760447 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 10.1 | -3.5 | -2.9 | SRP238608 | SRR10760446 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 10.0 | -2.9 | -3.5 | SRP056607 | SRR1942868 | Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden |
| 10.0 | -3.9 | -2.6 | SRP114806 | SRR5894763 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.0 | -3.2 | -3.1 | SRP097877 | SRR5205675 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
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