CoexViewer

Coexpression detail for SPK1 and GSL12
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath SPK1 guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 827328 At4g16340 0.87 7.38 6.33 6.44 13.20 2.04 5.19 2.57 1.99 0.86 6.43
ath GSL12 glucan synthase-like 12 831140 At5g13000 0.87
Platform:

coex z = 6.3288



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 827328
(z-scored expression)		 831140
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
39.0 -6.8 -5.7 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
37.7 -6.4 -5.9 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
31.5 -5.6 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.2 -4.9 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.3 -4.6 -4.8 ERP115370 ERR3333443 Arabidopsis tissue atlas
18.5 -4.3 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.5 4.6 3.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.3 -3.7 -4.4 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
16.3 3.8 4.3 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
16.0 3.8 4.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.0 -4.5 -3.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.0 -4.1 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
14.6 -3.7 -3.9 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
14.6 -3.7 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.3 -3.6 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.0 3.6 3.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.9 3.6 3.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -3.4 -4.0 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
13.7 3.7 3.7 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 -3.7 -3.6 SRP346154 SRR16948976 Plants grow in lunar regolith
13.4 -3.1 -4.4 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.4 -4.0 -3.3 SRP103817 SRR5444476 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
13.3 3.5 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.6 -3.5 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.6 -3.4 -3.6 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
12.4 -3.4 -3.7 SRP103817 SRR5444474 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
12.3 -3.1 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.3 3.5 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.3 3.2 3.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 -3.3 -3.8 SRP285090 SRR12697085 Differential alteration of plant functions by homologous fungal candidate effectors
12.1 -3.4 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.1 3.6 3.4 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.4 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -3.7 -3.2 SRP100064 SRR5263004 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.7 -3.6 -3.3 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.6 -3.8 -3.0 SRP114806 SRR5894725 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 -3.3 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 3.4 3.3 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.2 3.3 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.1 3.2 3.5 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.1 3.2 3.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 -2.7 -4.0 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
11.0 3.2 3.4 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 3.2 3.4 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 3.3 3.3 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.9 -3.6 -3.0 SRP311610 SRR14028822 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 -3.0 -3.6 SRP018034 SRR2079784 Time-course transcriptome of wild-type Arabidopsis leaf
10.6 -3.2 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.5 3.2 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.5 -3.3 -3.1 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.5 -3.2 -3.3 ERP109739 ERR2683774 Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
10.3 -3.6 -2.9 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 3.2 3.2 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.0 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 -3.2 -3.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.3 -3.1 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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