CoexViewer

Coexpression detail for EMB1025 and AT4G26800
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath EMB1025 Pentatricopeptide repeat (PPR) superfamily protein 827754 At4g20090 0.32 9.44 7.33 9.00 148.20 2.28 3.94 1.18 0.91 0.50 3.00
ath AT4G26800 Pentatricopeptide repeat (PPR) superfamily protein 828787 At4g26800 0.32
Platform:

coex z = 7.3265



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 827754
(z-scored expression)		 828787
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.6 -6.3 -5.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.8 -3.8 -6.8 SRP214585 SRR9681205 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
25.1 -3.6 -7.1 SRP187381 SRR8661974 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
19.6 -3.9 -5.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
19.3 -3.2 -6.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
18.5 -2.9 -6.3 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
18.2 -3.3 -5.5 SRP302122 SRR13450891 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
17.1 -4.4 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.8 -3.1 -5.1 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
15.1 -3.1 -4.9 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.9 -4.4 -3.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
14.8 -2.9 -5.1 SRP073485 SRR3401801 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.4 -4.3 -3.3 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.4 -4.3 -3.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.6 -3.9 -3.5 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
13.2 -4.4 -3.0 ERP115370 ERR3333436 Arabidopsis tissue atlas
13.0 -3.2 -4.0 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.0 -4.5 -2.9 SRP132865 SRR6726416 Molecular basis of flowering under natural long-day conditions in Arabidopsis
12.9 -3.7 -3.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.6 -3.7 -3.4 SRP199175 SRR9107800 The Arabidopsis YDL1 suppresses singlet oxygen-induced gene expression changes
12.5 -2.6 -4.9 SRP091641 SRR4426350 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.5 -2.6 -4.9 SRP091641 SRR4426947 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.5 -3.2 -3.9 ERP021422 ERR1827503 Arabidopsis stem cell transcriptome
11.3 -3.0 -3.8 SRP108255 SRR5627124 Identifications of a novel group of intra-genic interactive putative enhancers reveals a distinctive enhancer architectures in plants
11.2 -4.4 -2.6 ERP115370 ERR3333443 Arabidopsis tissue atlas
11.1 -3.2 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.5 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.9 -5.0 -2.2 SRP254177 SRR11429257 Time course of brassinolide treatment on Arabidopsis seedlings
10.9 -2.4 -4.5 SRP154321 SRR7535978 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.6 -2.2 -4.9 SRP091641 SRR4426808 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.4 -4.0 -2.6 SRP371011 SRR18808289 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.4 -2.8 -3.7 SRP193460 SRR8944857 Selective egg cell polyspermy bypasses the triploid block
10.1 -3.2 -3.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.1 -2.6 -3.8 SRP151348 SRR7429877 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
Note: Samples whose contribution is more than 10 are outputted.



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