CoexViewer

Coexpression detail for TUB9 and AT5G39410
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath TUB9 tubulin beta-9 chain 827837 At4g20890 0.96 5.08 4.82 3.96 27.50 -1.19 3.44 2.50 4.30 1.63 4.81
ath AT5G39410 Saccharopine dehydrogenase 833937 At5g39410 0.96
Platform:

coex z = 4.8157



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 827837
(z-scored expression)		 833937
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
28.8 -5.6 -5.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
24.8 -5.6 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.2 -5.2 -4.6 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
23.0 5.0 4.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.3 -4.4 -3.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.1 -4.1 -3.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.3 -3.5 -4.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.6 -3.8 -3.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.2 3.8 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.1 -5.3 -2.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
13.1 -3.2 -4.1 SRP253507 SRR11359762 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
13.0 -3.9 -3.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.9 5.1 2.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 -4.2 -3.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.0 3.4 3.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.9 -3.5 -3.4 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.6 3.6 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 -2.7 -4.2 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.4 -3.3 -3.4 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.3 -3.6 -3.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.3 -3.1 -3.6 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
11.3 3.8 3.0 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.2 3.7 3.0 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.9 3.6 3.0 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 3.8 2.8 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.0 3.5 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.7 2.9 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 3.6 2.9 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.7 -3.6 -3.0 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
10.4 4.3 2.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.4 -3.3 -3.2 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
10.3 -2.3 -4.4 SRP253504 SRR11359560 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.3 -3.4 -3.0 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.3 3.3 3.2 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.1 -2.8 -3.7 SRP091641 SRR4449326 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.1 -2.5 -4.0 SRP090459 SRR4296060 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
Note: Samples whose contribution is more than 10 are outputted.



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