CoexViewer

Coexpression detail for TUB9 and TOC1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath TUB9 tubulin beta-9 chain 827837 At4g20890 0.96 4.45 4.68 3.02 41.10 -0.59 3.81 0.29 3.52 2.61 6.45
ath TOC1 CCT motif -containing response regulator protein 836259 At5g61380 0.96
Platform:

coex z = 4.6826



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 827837
(z-scored expression)		 836259
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
28.7 -5.6 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.0 -5.6 -4.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.9 -5.2 -4.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
22.7 5.0 4.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
20.6 -5.3 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.1 -4.2 -4.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.7 -4.4 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.6 -3.9 -4.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.9 5.1 2.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.3 3.8 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
14.2 3.3 4.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
14.1 -3.8 -3.7 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.2 -3.5 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.0 3.7 3.5 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.9 3.8 3.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.8 -4.1 -3.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.7 -3.6 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.5 3.6 3.4 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.4 4.3 2.9 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.3 3.6 3.4 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.0 3.7 3.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 3.6 3.2 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.2 -2.9 -3.9 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.9 3.6 3.0 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.8 -2.7 -4.0 SRP091641 SRR4426683 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 3.4 3.1 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.7 -3.5 -3.0 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.6 3.9 2.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.5 -3.1 -3.4 SRP091641 SRR4426591 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.4 3.2 3.2 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 3.0 3.4 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.2 -3.2 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.1 3.3 3.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -2.7 -3.7 SRP091641 SRR4449319 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.0 -3.2 -3.2 SRP091641 SRR4426588 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
Note: Samples whose contribution is more than 10 are outputted.



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