CoexViewer
Coexpression detail for UNE11 and AT5G58750
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ath | UNE11 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 828192 | At4g00080 | 0.06 | 5.60 | 4.35 | 5.33 | 80.50 | 2.79 | 4.17 | 0.65 | 0.09 | -0.25 | 5.22 | |
ath | AT5G58750 | NAD(P)-binding Rossmann-fold superfamily protein | 835989 | At5g58750 | 0.06 |
coex z = 4.3501 |
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Sample contribution score* | 828192 (z-scored expression) |
835989 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
---|---|---|---|---|---|
73.7 | -10.1 | -7.3 | SRP114806 | SRR5894621 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
42.5 | -10.0 | -4.2 | SRP277946 | SRR12469767 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
28.2 | -10.0 | -2.8 | SRP277946 | SRR12469850 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
26.5 | 5.3 | 5.0 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
25.5 | -4.5 | -5.6 | SRP277946 | SRR12469639 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
23.9 | 3.1 | 7.6 | SRP097877 | SRR5205662 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
23.9 | 3.1 | 7.6 | SRP097877 | SRR5205796 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
19.7 | -5.8 | -3.4 | SRP277946 | SRR12469643 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
19.6 | -6.2 | -3.2 | SRP267137 | SRR12005744 | ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks |
19.5 | -4.5 | -4.3 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
18.3 | -6.5 | -2.8 | SRP187062 | SRR8645807 | Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis |
17.6 | -4.2 | -4.2 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
17.5 | -4.2 | -4.2 | SRP100712 | SRR5285649 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
17.4 | -4.7 | -3.7 | SRP114806 | SRR5894583 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
14.5 | 4.4 | 3.3 | SRP218723 | SRR9995098 | Plant 22-nt siRNAs mediate translational repression and stress adaptation |
13.8 | -4.4 | -3.1 | SRP323348 | SRR14766017 | Differentially expressed transcriptomes of NADases mutant in Arabidopsis |
13.6 | 3.5 | 3.9 | SRP282437 | SRR12642102 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
13.5 | -3.5 | -3.9 | SRP101274 | SRR5308791 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
12.8 | -4.5 | -2.8 | SRP277946 | SRR12469969 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
12.7 | 3.6 | 3.6 | SRP361288 | SRR18124834 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
12.2 | -3.9 | -3.1 | SRP308553 | SRR13805909 | The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators |
12.0 | -2.8 | -4.2 | SRP277946 | SRR12469990 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
11.9 | 3.2 | 3.7 | SRP282437 | SRR12642100 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
11.8 | 3.5 | 3.4 | SRP253504 | SRR11359542 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
11.4 | -4.3 | -2.6 | SRP044746 | SRR3046819 | Cryptochromes interact directly with PIFs to control plant growth in limiting blue light |
11.2 | 3.7 | 3.0 | SRP051764 | SRR1744391 | Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data) |
11.1 | -3.1 | -3.6 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
11.0 | -2.9 | -3.7 | SRP090459 | SRR4295991 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
10.8 | 3.4 | 3.2 | SRP282437 | SRR12642135 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
10.8 | -2.8 | -3.9 | SRP100064 | SRR5263204 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
10.7 | 4.1 | 2.6 | SRP346154 | SRR16948992 | Plants grow in lunar regolith |
10.5 | 3.9 | 2.7 | SRP049101 | SRR1617519 | RNA-seq analysis of alternative splicing between two Arabidopsis accessions and its inheritance in hybrid |
10.0 | -2.9 | -3.5 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
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