CoexViewer

Coexpression detail for AT4G22840 and RR10
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G22840 Sodium Bile acid symporter family 828383 At4g22840 0.33 5.15 4.20 4.69 3.30 1.38 4.08 0.00 2.73 0.34 3.52
ath RR10 response regulator 10 829322 At4g31920 0.33
Platform:

coex z = 4.2004



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 828383
(z-scored expression)		 829322
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
29.2 -4.7 -6.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
23.4 -4.5 -5.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.1 -4.3 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.5 -4.8 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.1 -5.4 -3.5 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
18.5 3.9 4.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.1 4.0 4.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.0 -3.5 -4.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
15.9 -4.0 -4.0 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.5 -3.4 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
14.9 -6.2 -2.4 SRP266133 SRR11934462 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.8 -5.2 -2.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.2 -5.0 -2.9 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -6.2 -2.2 SRP266133 SRR11934513 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.7 -3.8 -3.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
13.4 -3.6 -3.7 SRP018034 SRR2079771 Time-course transcriptome of wild-type Arabidopsis leaf
13.4 -4.2 -3.2 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.1 -3.3 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.7 -3.6 -3.5 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.4 -3.4 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.0 -3.2 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.1 -3.1 -3.5 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.0 3.1 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.6 -3.6 -3.0 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.5 3.6 3.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.5 -2.2 -4.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.5 2.9 3.5 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -4.2 -2.5 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.4 -3.1 -3.3 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 2.8 3.6 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.3 -3.1 SRP039091 SRR1179987 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.1 -3.1 -3.3 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
10.1 -3.1 -3.3 SRP101641 SRR5330626 Chloroplast signalling gates thermotolerance in Arabidopsis
10.0 2.9 3.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
Note: Samples whose contribution is more than 10 are outputted.



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