CoexViewer

Coexpression detail for AT4G22840 and AT5G06480
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G22840 Sodium Bile acid symporter family 828383 At4g22840 0.33 4.79 3.77 4.51 314.70 1.06 1.71 0.37 1.37 0.96 3.61
ath AT5G06480 Immunoglobulin E-set superfamily protein 830536 At5g06480 0.33
Platform:

coex z = 3.7681



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 828383
(z-scored expression)		 830536
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
25.9 -4.5 -5.8 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
23.3 -4.0 -5.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
18.4 -6.2 -2.9 SRP266133 SRR11934513 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
18.4 -6.2 -2.9 SRP266133 SRR11934462 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
17.4 -4.2 -4.1 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
16.1 -4.7 -3.4 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.1 -3.1 -5.2 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.4 -3.5 -4.5 SRP285119 SRR12698768 Time of day prioritizes the pool of translating mRNAs in response to heat stress
14.6 -3.5 -4.2 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.9 -4.0 -3.5 SRP187062 SRR8645802 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
13.8 -4.3 -3.2 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
13.7 -4.2 -3.3 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.6 -2.6 -5.2 SRP114806 SRR5894409 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.8 -3.9 -3.3 SRP254177 SRR11429268 Time course of brassinolide treatment on Arabidopsis seedlings
12.6 -3.3 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.5 -2.5 -4.9 SRP074485 SRR3480182 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
12.2 -3.5 -3.5 SRP187062 SRR8645808 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
11.9 -2.9 -4.1 SRP103736 SRR5440863 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.9 -3.2 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.9 -4.4 -2.7 SRP105272 SRR5482528 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
11.8 -2.8 -4.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.8 -2.2 -5.4 SRP100938 SRR5304745 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.7 -2.9 -4.0 SRP051513 SRR1734309 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
11.4 -4.0 -2.8 SRP339340 SRR16119309 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
11.2 -3.5 -3.2 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.0 -2.2 -5.0 SRP100712 SRR5285845 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.9 2.9 3.8 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 -3.4 -3.2 ERP115136 ERR3310307 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
10.9 -2.6 -4.2 SRP091641 SRR4426858 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 -3.8 -2.8 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.7 -1.8 -5.9 SRP214585 SRR9681276 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.5 -3.9 -2.7 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
10.4 -2.5 -4.2 SRP091641 SRR4426360 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -3.4 -3.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.0 -3.5 -2.9 SRP148498 SRR7187196 A regulatory module controls plant growth and stress response by modulating hormone level
Note: Samples whose contribution is more than 10 are outputted.



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