CoexViewer

Coexpression detail for AT4G22840 and AT1G25480
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT4G22840 Sodium Bile acid symporter family 828383 At4g22840 0.33 4.46 4.38 1.46
ath AT1G25480 aluminum activated malate transporter family protein 839134 At1g25480 0.33
Platform:

coex z = 4.3833



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 828383
(z-scored expression)		 839134
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.6 -6.5 -4.7 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
30.5 -5.2 -5.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
22.2 -4.5 -5.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.0 -4.4 -4.7 SRP105272 SRR5482528 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
20.8 -6.2 -3.3 SRP266133 SRR11934462 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
20.5 -4.3 -4.8 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.9 -4.8 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.7 -6.5 -2.7 ERP116123 ERR3414884 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
17.4 4.0 4.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.2 -4.2 -4.1 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
15.9 -3.5 -4.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
15.3 -3.3 -4.7 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
14.8 -3.6 -4.1 SRP100064 SRR5263029 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
14.1 -3.3 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.0 -3.1 -4.6 SRP100064 SRR5263035 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
13.9 3.9 3.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.8 -3.4 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.5 -3.4 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
13.4 -4.0 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.3 -3.3 -4.1 SRP039091 SRR1179987 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.6 -4.7 -2.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
12.4 -3.2 -3.9 SRP214325 SRR9672820 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
12.3 -3.5 -3.6 SRP229078 SRR10416643 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
12.2 -3.2 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.1 -3.1 -3.9 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
12.0 -4.3 -2.8 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
11.7 -3.4 -3.5 SRP056607 SRR1942849 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
11.5 -3.1 -3.7 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.4 3.3 3.5 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -4.2 -2.7 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.3 -3.5 -3.2 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.2 -2.5 -4.4 SRP266133 SRR11934423 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.2 -3.6 -3.1 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
11.1 -5.4 -2.0 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.8 -2.9 -3.7 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.7 -2.1 -5.0 SRP155742 SRR8699967 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.7 -3.5 -3.1 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.6 3.6 3.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.5 2.9 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.4 3.1 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.4 -3.5 -3.0 SRP277946 SRR12470084 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -6.2 -1.7 SRP266133 SRR11934513 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.2 -3.4 -3.0 ERP115136 ERR3310307 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
10.2 -3.2 -3.2 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 3.0 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 -2.8 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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