CoexViewer

Coexpression detail for AT4G23540 and NRPA2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G23540 ARM repeat superfamily protein 828454 At4g23540 0.5 9.26 8.59 7.42 9.20 2.98 4.22 4.66 3.63 2.56 7.12
ath NRPA2 nuclear RNA polymerase A2 839872 At1g29940 0.5
Platform:

coex z = 8.5902



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 828454
(z-scored expression)		 839872
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.9 -6.0 -5.8 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
30.0 -5.3 -5.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
24.6 -4.8 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.0 -5.8 -4.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
23.4 -4.7 -4.9 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.9 -6.2 -3.7 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
21.9 -4.2 -5.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.7 4.1 4.1 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
16.7 -3.9 -4.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.5 -4.3 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.1 -4.0 -4.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.5 4.0 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.9 -4.2 -3.6 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
14.1 -3.5 -4.0 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
14.1 -3.7 -3.8 SRP073485 SRR3401801 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.9 -6.9 -1.9 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.6 -3.4 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.5 3.7 3.4 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
12.5 -3.1 -4.0 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
12.5 -3.5 -3.6 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
12.4 -3.3 -3.7 SRP214585 SRR9681201 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
12.3 -3.8 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.9 -4.0 -3.0 SRP257291 SRR11568018 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
11.7 -3.5 -3.3 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.5 -3.9 -2.9 SRP076846 SRR3707344 The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status (mRNA-seq)
11.3 -3.3 -3.4 SRP214585 SRR9681199 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
11.1 -3.0 -3.7 SRP187381 SRR8661970 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.1 3.3 3.4 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.0 3.3 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.0 3.2 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.9 -3.2 -3.4 SRP148699 SRR7204075 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.9 -3.0 -3.6 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
10.9 3.5 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.8 3.3 3.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.1 3.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.5 -4.2 -2.5 SRP063017 SRR2221848 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.5 3.1 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.5 -3.1 -3.4 SRP238084 SRR10733479 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
10.4 -3.0 -3.5 ERP013651 ERR1194832 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.4 3.0 3.4 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.4 -4.1 -2.5 SRP281951 SRR12620957 RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S
10.2 3.0 3.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -2.8 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.2 3.1 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.0 -3.4 SRP187381 SRR8661968 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.1 -3.4 -3.0 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.1 3.3 3.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.0 -3.4 SRP311610 SRR14028790 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
Note: Samples whose contribution is more than 10 are outputted.



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