CoexViewer
Coexpression detail for AT4G23670 and CYP710A2
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G23670 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 828467 | At4g23670 | 0.99 | 5.20 | 4.52 | 4.49 | 58.00 | 0.77 | 4.20 | 3.35 | 1.58 | 2.30 | 1.17 | |
| ath | CYP710A2 | cytochrome P450, family 710, subfamily A, polypeptide 2 | 818012 | At2g34490 | 0.99 |
|
coex z = 4.5164 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 828467 (z-scored expression) |
818012 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 29.8 | -5.2 | -5.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 24.0 | -5.2 | -4.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 18.4 | -4.5 | -4.1 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 17.8 | 5.1 | 3.5 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 17.2 | 3.3 | 5.3 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.8 | 4.1 | 4.1 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 16.0 | -3.0 | -5.3 | SRP100712 | SRR5285678 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 15.4 | 4.2 | 3.7 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.0 | -4.1 | -3.6 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 15.0 | -3.9 | -3.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.2 | -4.0 | -3.6 | ERP118109 | ERR3624354 | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
| 13.9 | 2.5 | 5.6 | SRP100064 | SRR5263230 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 13.0 | 3.8 | 3.5 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.8 | -3.4 | -3.5 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 11.6 | -3.3 | -3.5 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 11.3 | 3.5 | 3.2 | SRP325022 | SRR14877263 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 10.9 | -3.0 | -3.6 | SRP125388 | SRR6312356 | Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration |
| 10.8 | -3.2 | -3.4 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.8 | 3.3 | 3.3 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | 3.5 | 3.1 | SRP325022 | SRR14877265 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 10.6 | 3.0 | 3.5 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.6 | -3.3 | -3.2 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.4 | 3.1 | 3.3 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.4 | 2.6 | 3.9 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.2 | -2.7 | -3.8 | SRP149815 | SRR7264708 | Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity |
| 10.2 | -2.3 | -4.4 | SRP101274 | SRR5308820 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
| 10.1 | -3.7 | -2.8 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
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