CoexViewer
Coexpression detail for AT4G23670 and VSP1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G23670 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 828467 | At4g23670 | 0.99 | 3.67 | 3.87 | 3.15 | |
| ath | VSP1 | vegetative storage protein 1 | 832547 | At5g24780 | 0.99 |
|
coex z = 3.8679 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 828467 (z-scored expression) |
832547 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.8 | -3.4 | -7.3 | SRP277946 | SRR12469834 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 17.4 | -5.2 | -3.4 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.1 | 4.1 | 4.2 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 13.1 | -3.0 | -4.3 | SRP100712 | SRR5285678 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 12.3 | 3.5 | 3.5 | SRP325022 | SRR14877262 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 12.3 | 3.5 | 3.5 | SRP325022 | SRR14877263 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 12.3 | 3.5 | 3.5 | SRP325022 | SRR14877264 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 12.2 | 3.3 | 3.8 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 12.2 | 3.5 | 3.5 | SRP325022 | SRR14877265 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 11.9 | 3.4 | 3.5 | SRP277946 | SRR12470201 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.6 | 3.8 | 3.1 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.8 | 2.8 | 3.9 | SRP277946 | SRR12469969 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | -3.4 | -3.2 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.7 | -2.4 | -4.4 | SRP188810 | SRR8749784 | RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr |
| 10.7 | -4.5 | -2.4 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 10.6 | 3.1 | 3.4 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.6 | 4.2 | 2.5 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.4 | -4.1 | -2.5 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 10.1 | 3.6 | 2.8 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
The preparation time of this page was 0.8 [sec].
