CoexViewer

Coexpression detail for AT4G25730 and EDA7
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G25730 FtsJ-like methyltransferase family protein 828678 At4g25730 0.88 9.31 8.64 7.46 18.20 3.52 4.19 3.14 3.37 2.42 3.86
ath EDA7 embryo sac development arrest 7 824866 At3g56990 0.88
Platform:

coex z = 8.6401



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 828678
(z-scored expression)		 824866
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.8 -5.5 -5.6 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
30.0 -6.2 -4.8 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
25.5 -4.6 -5.5 ERP115370 ERR3333443 Arabidopsis tissue atlas
25.2 -5.3 -4.8 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.1 -4.6 -5.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.4 -4.9 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.9 3.9 5.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.3 4.2 4.2 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
15.1 -4.0 -3.8 SRP073485 SRR3401801 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.4 -3.8 -3.8 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
14.4 -3.9 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
14.4 -3.5 -4.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.4 -4.2 -3.5 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
14.0 4.0 3.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.1 3.5 3.7 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
13.0 -3.3 -3.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 3.0 4.2 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 -3.2 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.4 -3.6 -3.5 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.3 3.5 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.2 -3.4 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.9 -3.1 -3.8 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.8 -3.5 -3.3 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
11.7 -3.1 -3.8 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.7 3.4 3.4 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
11.7 -3.4 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.7 -3.2 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
11.7 -3.5 -3.4 SRP187381 SRR8661970 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.7 -3.8 -3.1 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
11.2 -3.4 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -2.6 -4.2 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.0 -3.1 -3.5 SRP349117 SRR17115567 Transcriptomic profiling of Arabidopsis hypocotyls of brl3 mutants and tissue-specific overexpressors under elevated temperatures
11.0 -3.5 -3.1 SRP187381 SRR8661972 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.0 -3.4 -3.2 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.8 3.3 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.6 -3.6 -3.0 ERP013651 ERR1194832 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.5 3.2 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.5 -3.2 -3.2 SRP214585 SRR9681201 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.3 3.3 3.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 -3.1 -3.3 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -3.5 -2.9 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.0 -3.2 -3.1 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
Note: Samples whose contribution is more than 10 are outputted.



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