CoexViewer

Coexpression detail for AT4G29520 and GFAT
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 11.30 10.88 8.66 16.90 0.87 0.73 2.64 4.96 1.52 6.59
ath GFAT putative glucosamine-fructose-6-phosphate aminotransferase 821995 At3g24090 0.55
Platform:

coex z = 10.8849



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 821995
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
30.4 -5.7 -5.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
23.6 -3.0 -8.0 SRP100064 SRR5263004 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
19.7 -3.8 -5.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
17.4 -4.3 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.0 -4.2 -4.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.3 -3.5 -4.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.7 -3.6 -4.3 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
13.7 3.2 4.2 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.5 -3.6 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.1 -3.4 -3.8 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.7 3.8 3.4 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
12.7 -3.4 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.4 -3.7 -3.4 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.2 -3.4 -3.6 SRP091641 SRR4426773 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.7 -3.4 -3.4 ERP118109 ERR3624485 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.6 -4.0 -2.9 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -3.3 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 -3.9 -2.9 SRP277946 SRR12469612 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.3 3.4 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.8 -2.9 -3.7 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
10.7 -3.3 -3.3 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.7 3.6 3.0 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.6 -3.2 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.6 -2.9 -3.6 SRP277946 SRR12469954 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.2 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 3.4 3.0 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.2 3.3 3.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.1 4.0 2.5 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
10.1 -2.4 -4.2 SRP132865 SRR6726417 Molecular basis of flowering under natural long-day conditions in Arabidopsis
10.1 -4.6 -2.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
10.1 -2.7 -3.7 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.0 -3.5 -2.9 SRP103817 SRR5444401 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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