CoexViewer

Coexpression detail for AT4G29520 and AT5G50460
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 14.41 13.73 11.20 14.00 1.74 4.15 1.92 4.39 3.47 7.44
ath AT5G50460 secE/sec61-gamma protein transport protein 835114 At5g50460 0.55
Platform:

coex z = 13.7282



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 835114
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
23.5 -3.8 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.5 -5.7 -4.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.9 -4.2 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.1 -3.5 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
17.9 -4.3 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.5 4.0 4.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
15.2 4.0 3.8 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
15.0 -4.0 -3.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.7 3.3 4.4 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
14.3 -3.6 -3.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
14.0 -3.6 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.7 3.8 3.6 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
13.6 3.6 3.8 SRP114806 SRR5894687 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.6 -3.7 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.1 -3.2 -4.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.6 3.2 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.4 -3.4 -3.6 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 3.9 3.1 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.9 3.5 3.4 SRP244461 SRR10959655 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
11.7 -3.2 -3.7 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.5 3.4 3.4 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.3 -3.2 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -4.9 -2.3 SRP191093 SRR8859574 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
11.1 -3.3 -3.4 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.7 3.1 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.4 -3.4 -3.1 SRP091641 SRR4426773 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -3.1 -3.3 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.3 -3.4 -3.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.3 -3.5 -2.9 SRP361288 SRR18124807 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.1 3.1 3.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.0 2.8 3.7 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -2.9 -3.4 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
Note: Samples whose contribution is more than 10 are outputted.



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