CoexViewer

Coexpression detail for AT4G29520 and CRT1b
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 15.29 14.44 11.99 10.20 2.82 3.97 3.53 4.74 2.81 10.26
ath CRT1b calreticulin 1b 837441 At1g09210 0.55
Platform:

coex z = 14.4432



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 837441
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
22.2 -3.8 -5.8 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
20.0 -5.7 -3.5 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
19.9 -4.8 -4.2 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
19.6 -4.3 -4.6 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
19.5 -3.5 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.2 -3.8 -5.1 SRP267137 SRR12005766 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
18.4 -4.2 -4.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.3 -4.6 -3.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.2 -4.0 -4.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.0 3.2 4.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.9 -4.5 -3.3 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
14.8 4.0 3.7 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
14.6 -3.7 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.4 -3.6 -3.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.9 3.8 3.7 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
13.7 -3.2 -4.3 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.6 -3.6 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.4 -3.4 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.7 -3.2 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 3.5 3.3 SRP271641 SRR12211746 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
11.3 -3.3 -3.4 SRP136326 SRR6941655 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
11.3 -2.9 -3.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.1 4.0 2.8 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
11.1 3.6 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.9 -3.2 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.9 -3.1 -3.5 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.9 -3.4 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -4.0 -2.7 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.8 3.1 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.7 3.4 3.2 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.7 -3.4 -3.2 SRP091641 SRR4426773 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 3.4 3.2 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.5 -3.7 -2.8 SRP126574 SRR6369399 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.2 -3.3 -3.1 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.2 -3.3 -3.1 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 3.1 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
Note: Samples whose contribution is more than 10 are outputted.



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