CoexViewer

Coexpression detail for AT4G29520 and PDIL2-2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 20.10 18.57 16.19 8.00 3.11 4.61 3.42 4.17 3.02 9.71
ath PDIL2-2 PDI-like 2-2 839355 At1g04980 0.55
Platform:

coex z = 18.567



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 839355
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
16.3 4.0 4.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
15.8 -3.2 -4.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.7 -3.5 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.2 4.0 3.8 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
15.1 -4.0 -3.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.9 -4.3 -3.5 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.7 3.8 3.6 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
13.6 -4.6 -2.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
13.4 3.2 4.1 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.3 -3.6 -3.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.1 -3.4 -3.8 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.1 -4.2 -3.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
12.9 -3.1 -4.1 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
12.7 -3.7 -3.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.6 -3.7 -3.4 SRP126574 SRR6369399 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.4 -3.2 -3.8 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 -3.1 -3.9 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
11.8 -5.7 -2.1 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.7 -4.9 -2.4 SRP191093 SRR8859574 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
11.6 -3.8 -3.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.3 -2.9 -3.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.9 -3.3 -3.3 SRP136326 SRR6941655 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
10.8 3.5 3.1 SRP271641 SRR12211746 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
10.5 3.4 3.1 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.4 3.9 2.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 -3.0 -3.4 SRP091641 SRR4426683 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -3.3 -3.1 SRP187381 SRR8662036 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.2 -2.9 -3.5 SRP189792 SRR8800735 Role of AtMLKLs in response to powdery mildew fungus
10.2 3.6 2.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.2 3.3 3.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.2 -3.2 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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