CoexViewer

Coexpression detail for AT4G29520 and AT1G27350
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 10.52 11.22 2.97
ath AT1G27350 Ribosome associated membrane protein RAMP4 839624 At1g27350 0.55
Platform:

coex z = 11.2174



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 839624
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
19.4 -4.2 -4.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.1 -3.5 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
17.7 -3.8 -4.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
17.6 -4.3 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.4 4.0 4.3 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
17.3 3.3 5.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
14.8 -4.0 -3.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.5 -3.6 -4.0 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.2 3.6 3.9 SRP114806 SRR5894687 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.9 3.6 3.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.9 2.8 4.9 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.4 -3.7 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.3 -3.6 -3.6 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
13.2 3.8 3.5 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
12.8 -3.2 -4.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.7 3.2 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.6 4.0 3.1 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
12.5 -5.7 -2.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.4 -4.8 -2.6 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.0 -3.9 -3.1 SRP277946 SRR12469612 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -4.9 -2.4 SRP191093 SRR8859574 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
11.6 -3.4 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -4.5 -2.6 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.4 2.8 4.1 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 3.4 3.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 -3.3 -3.4 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
11.1 -3.4 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.1 -2.9 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.0 -2.8 -4.0 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.9 -3.2 -3.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.7 2.6 4.1 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 3.5 3.0 SRP271641 SRR12211746 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
10.5 3.3 3.2 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 -3.6 -2.9 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.3 3.9 2.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 3.1 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.1 2.8 3.6 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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