CoexViewer

Coexpression detail for AT4G29520 and AT1G29310
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 11.41 10.35 9.38 16.50 0.92 3.68 3.40 4.20 2.57 5.52
ath AT1G29310 SecY protein transport family protein 839805 At1g29310 0.55
Platform:

coex z = 10.3528



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 839805
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
23.7 -3.8 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
19.5 -4.2 -4.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.3 -5.7 -3.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.1 -3.5 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
17.9 -4.3 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.6 -3.6 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.3 3.2 4.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.2 -4.0 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.1 4.0 3.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.2 4.0 3.3 SRP044776 SRR1523921 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
12.9 -4.8 -2.7 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.8 -3.4 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.6 -3.2 -3.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.5 -3.7 -3.4 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.2 3.6 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.2 -2.2 -5.4 ERP123539 ERR4471735 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.2 -2.2 -5.4 ERP123539 ERR4471734 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.1 3.4 3.6 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.0 3.8 3.2 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
12.0 -3.2 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 3.1 3.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.0 -4.0 -2.8 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.0 -3.2 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.9 -3.4 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 3.4 3.1 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.2 3.3 3.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.2 -3.1 -3.2 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.1 3.3 3.1 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.1 -2.6 -3.8 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.0 -2.5 -4.1 ERP115370 ERR3333441 Arabidopsis tissue atlas
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.7 [sec].