CoexViewer

Coexpression detail for AT4G29520 and Hrd1B
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT4G29520 nucleophosmin 829073 At4g29520 0.55 10.52 11.18 3.32
ath Hrd1B RING/U-box superfamily protein 842812 At1g65040 0.55
Platform:

coex z = 11.1842



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829073
(z-scored expression)		 842812
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
18.3 -4.2 -4.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.2 -4.3 -4.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
18.2 -3.5 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
16.1 3.3 4.9 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
15.6 -5.7 -2.7 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.0 -3.6 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.9 -3.6 -4.1 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
14.7 -3.7 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -4.0 -3.7 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
14.1 -4.0 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.1 3.8 3.7 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
14.0 -4.8 -2.9 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
13.7 -3.4 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.4 -3.8 -3.5 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
13.1 -3.8 -3.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
13.0 4.0 3.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.2 3.2 3.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.2 3.6 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.1 3.4 3.6 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.7 -3.6 -3.2 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
11.7 3.4 3.5 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.7 -4.5 -2.6 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.6 3.5 3.3 SRP244461 SRR10959655 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
11.6 -3.2 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -2.9 -3.9 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.1 -3.5 -3.2 SRP361288 SRR18124807 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.0 -3.2 -3.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.0 -3.0 -3.7 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.6 -2.9 -3.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.5 -3.2 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.4 -3.1 -3.3 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 3.1 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.3 -3.3 -3.1 SRP136326 SRR6941655 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
10.3 -2.9 -3.5 SRP101274 SRR5308791 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.2 -3.4 -3.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 2.7 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 2.8 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 2.8 3.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
Note: Samples whose contribution is more than 10 are outputted.



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