CoexViewer
Coexpression detail for AT4G30370 and AT3G09032
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G30370 | RING/U-box superfamily protein | 829160 | At4g30370 | 0.17 | 4.20 | 4.52 | 2.03 | |
| ath | AT3G09032 | josephin-like protein | 2745876 | At3g09032 | 0.17 |
|
coex z = 4.5164 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 829160 (z-scored expression) |
2745876 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 23.3 | -4.4 | -5.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 19.8 | -3.8 | -5.2 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 17.9 | -3.9 | -4.6 | SRP266133 | SRR11934512 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 15.5 | -4.0 | -3.9 | SRP090457 | SRR4295785 | RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions |
| 14.3 | -4.3 | -3.3 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 14.0 | 2.3 | 6.1 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.9 | -3.9 | -3.6 | SRP333850 | SRR15593616 | Arabidopsis COILIN orchestrates transcriptional as well as post-transcriptional regulation to combat pathogens |
| 13.6 | -3.0 | -4.6 | SRP266133 | SRR11934593 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 13.5 | -3.0 | -4.5 | SRP119072 | SRR6113963 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
| 13.5 | -3.1 | -4.3 | SRP277946 | SRR12470099 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.4 | -3.9 | -3.5 | SRP150217 | SRR7289615 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.9 | -3.7 | -3.5 | SRP073724 | SRR3419765 | Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system |
| 12.6 | -2.5 | -5.0 | SRP091641 | SRR4449330 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.1 | -3.0 | -4.0 | SRP163443 | SRR8060876 | RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration |
| 11.9 | -1.6 | -7.4 | SRP220476 | SRR10072786 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 11.4 | -3.3 | -3.4 | SRP155742 | SRR8699957 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 11.3 | -3.8 | -2.9 | SRP126292 | SRR6356154 | The Arabidopsis homolog of human G3BP1 is a key regulator of stomatal and aploplastic immunity |
| 11.2 | -2.0 | -5.6 | SRP101641 | SRR5330626 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 11.0 | -2.1 | -5.1 | SRP219510 | SRR10030505 | RNA-seq analysis of D-tagatose-treated Arabidopsis thaliana inoculated with Hyaloperonospora arabidopsidis isolate Noco-2 |
| 10.7 | -3.4 | -3.2 | SRP258701 | SRR11614791 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 10.5 | -3.0 | -3.5 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.5 | -3.0 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.4 | -4.0 | -2.6 | SRP097877 | SRR5205730 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.4 | -3.0 | -3.5 | ERP013651 | ERR1194830 | Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid |
| 10.4 | -1.9 | -5.4 | SRP158306 | SRR7695075 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
| 10.4 | -1.9 | -5.4 | SRP158306 | SRR7695072 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
| 10.3 | -3.7 | -2.8 | SRP114806 | SRR5894586 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.3 | -3.9 | -2.6 | SRP266133 | SRR11934625 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.1 | 2.1 | 4.8 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.1 | 3.2 | 3.2 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.0 | -4.5 | -2.2 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
The preparation time of this page was 0.8 [sec].
