CoexViewer
Coexpression detail for AT4G30370 and HB24
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G30370 | RING/U-box superfamily protein | 829160 | At4g30370 | 0.17 | 4.21 | 4.15 | 1.97 | |
| ath | HB24 | homeobox protein 24 | 816350 | At2g18350 | 0.17 |
|
coex z = 4.1505 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 829160 (z-scored expression) |
816350 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 27.0 | -3.1 | -8.7 | SRP277946 | SRR12469603 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 24.8 | -3.7 | -6.8 | SRP100938 | SRR5304901 | During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight. |
| 22.4 | -4.5 | -5.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 18.5 | -4.4 | -4.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 16.0 | -3.9 | -4.1 | SRP150217 | SRR7289615 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.5 | -3.7 | -3.9 | SRP065994 | SRR2932456 | Identification of plant vacuolar transporters mediating phosphate storage |
| 13.9 | -4.3 | -3.2 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 12.6 | -3.8 | -3.3 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 12.2 | -5.8 | -2.1 | SRP282437 | SRR12642217 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 12.0 | -5.1 | -2.3 | SRP091641 | SRR4426634 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.9 | -3.0 | -4.0 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.9 | -1.4 | -8.7 | SRP114806 | SRR5894457 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.7 | -2.6 | -4.6 | SRP258701 | SRR11614758 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 11.6 | -2.7 | -4.3 | SRP035269 | SRR1105593 | RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids |
| 11.4 | 3.2 | 3.6 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.8 | -3.9 | -2.7 | SRP266133 | SRR11934512 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.2 | -2.7 | -3.8 | SRP137763 | SRR6950029 | The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0] |
| 10.2 | -5.1 | -2.0 | SRP091641 | SRR4426462 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.1 | -2.3 | -4.4 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
The preparation time of this page was 0.7 [sec].
