CoexViewer

Coexpression detail for AT4G30400 and AOP1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G30400 RING/U-box superfamily protein 829163 At4g30400 0.47 6.12 5.81 4.76 2.80 0.90 4.56 2.05 3.21 1.84 4.42
ath AOP1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 828100 At4g03070 0.47
Platform:

coex z = 5.8133



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829163
(z-scored expression)		 828100
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
38.8 -6.9 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
33.8 6.6 5.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
31.6 5.8 5.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
24.0 -5.3 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.0 -4.9 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.6 -3.8 -5.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
18.9 -3.9 -4.8 SRP091641 SRR4426368 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
18.7 4.9 3.8 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.5 -3.7 -4.4 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
16.0 -1.7 -9.2 SRP277946 SRR12470091 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 -3.6 -4.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
14.6 -3.7 -3.9 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.8 -4.1 -3.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.7 -4.1 -3.3 SRP371011 SRR18808237 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
13.4 -3.6 -3.8 ERP116123 ERR3414883 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.2 -4.7 -2.8 SRP139506 SRR6982864 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
13.1 -3.7 -3.5 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
13.1 -3.9 -3.3 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.0 -6.1 -2.1 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.0 3.9 3.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.2 -3.2 -3.8 SRP277946 SRR12469849 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.2 -3.8 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.7 -2.7 -4.4 SRP073485 SRR3401779 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.6 -4.0 -2.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 -3.9 -3.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.4 -2.3 -5.0 SRP103817 SRR5444386 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.7 -2.6 -4.2 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.7 -3.9 -2.7 SRP091641 SRR4426632 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 -3.2 -3.3 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.4 -2.1 -5.0 SRP132865 SRR6726467 Molecular basis of flowering under natural long-day conditions in Arabidopsis
10.3 -3.3 -3.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
Note: Samples whose contribution is more than 10 are outputted.



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