CoexViewer
Coexpression detail for AT4G34290 and YLMG1-1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G34290 | SWIB/MDM2 domain superfamily protein | 829579 | At4g34290 | 0.75 | 9.51 | 8.86 | 7.58 | 4.90 | 3.64 | 5.17 | 3.74 | 2.83 | 2.14 | 7.26 | |
| ath | YLMG1-1 | YGGT family protein | 819931 | At3g07430 | 0.75 |
|
coex z = 8.8563 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 829579 (z-scored expression) |
819931 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 34.8 | -6.0 | -5.8 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 31.3 | -5.7 | -5.5 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 22.9 | -4.5 | -5.1 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 21.3 | -4.2 | -5.0 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 20.7 | -4.3 | -4.8 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 19.8 | -4.6 | -4.3 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 17.9 | -3.7 | -4.8 | ERP118109 | ERR3624435 | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
| 14.6 | -3.8 | -3.9 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 13.9 | -4.6 | -3.1 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 13.1 | -4.4 | -2.9 | SRP285902 | SRR12747513 | Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis |
| 12.3 | 3.5 | 3.5 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
| 12.0 | 3.6 | 3.3 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.9 | 3.7 | 3.2 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.8 | -3.6 | -3.3 | SRP103817 | SRR5444399 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 11.8 | 3.6 | 3.3 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.6 | -3.1 | -3.7 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 11.5 | -3.9 | -3.0 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.5 | -3.3 | -3.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 11.4 | -3.5 | -3.2 | SRP114806 | SRR5894494 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.3 | -3.5 | -3.3 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.1 | -3.6 | -3.1 | SRP101274 | SRR5308642 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
| 11.1 | 3.7 | 3.0 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | -3.5 | -3.1 | SRP114806 | SRR5894703 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.9 | -4.2 | -2.6 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.8 | -3.2 | -3.3 | SRP114806 | SRR5894632 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.8 | 3.4 | 3.2 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
| 10.7 | 3.1 | 3.4 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.5 | -3.5 | -3.0 | SRP150217 | SRR7289615 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | -3.3 | -3.1 | SRP150217 | SRR7289598 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.1 | -3.1 | -3.3 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.1 | -3.0 | -3.4 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.0 | -3.1 | -3.2 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
The preparation time of this page was 1.0 [sec].
