CoexViewer

Coexpression detail for AT4G37240 and AT5G42200
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G37240 HTH-type transcriptional regulator 829878 At4g37240 0.29 4.57 3.80 4.09 309.30 0.73 1.52 2.05 1.93 -1.38 2.29
ath AT5G42200 RING/U-box superfamily protein 834225 At5g42200 0.29
Platform:

coex z = 3.8014



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 829878
(z-scored expression)		 834225
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
23.5 4.7 5.0 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
22.5 4.6 4.9 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
20.6 4.6 4.5 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.5 -4.3 -4.0 SRP091641 SRR4426789 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
17.4 -3.3 -5.2 SRP345854 SRR16934651 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.3 -3.9 -4.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
15.8 -4.5 -3.5 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.6 -2.8 -5.2 SRP324081 SRR14813614 ARATH-IN-OUT
14.6 -2.8 -5.2 SRP362867 SRR18254736 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
14.3 -3.5 -4.0 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
14.0 -3.8 -3.7 SRP187062 SRR8645799 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
13.7 -4.3 -3.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.2 -4.2 -3.1 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.0 -3.5 -3.5 SRP258701 SRR11614774 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.9 -3.5 -3.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.7 -4.9 -2.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 -3.3 -3.5 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.4 -3.6 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -3.7 -3.1 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.2 3.1 3.6 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 -4.3 -2.6 SRP251261 SRR11214534 Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes
10.3 -2.7 -3.9 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 3.1 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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