CoexViewer
Coexpression detail for EDS5 and LOX5
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | EDS5 | MATE efflux family protein | 830058 | At4g39030 | 0.42 | 4.03 | 3.44 | 3.53 | 129.70 | -0.06 | 3.85 | 2.55 | 1.22 | -1.89 | 3.43 | |
| ath | LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | 821808 | At3g22400 | 0.42 |
|
coex z = 3.4355 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 830058 (z-scored expression) |
821808 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.5 | -5.0 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 14.5 | -5.0 | -2.9 | SRP132865 | SRR6726414 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 14.4 | 4.2 | 3.4 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.8 | -3.8 | -3.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.4 | -3.5 | -3.8 | SRP065450 | SRR2850579 | Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana |
| 12.8 | 3.7 | 3.4 | SRP103736 | SRR5440785 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 12.5 | -3.2 | -4.0 | SRP126574 | SRR6369399 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 12.5 | -3.2 | -3.8 | SRP337622 | SRR15931267 | Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency |
| 12.5 | -3.5 | -3.5 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.4 | -4.0 | -3.1 | SRP102178 | SRR5360867 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 12.2 | -3.3 | -3.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.7 | -2.9 | -4.0 | ERP021422 | ERR1827503 | Arabidopsis stem cell transcriptome |
| 11.3 | 3.8 | 3.0 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.0 | -2.3 | -4.7 | SRP371011 | SRR18808259 | Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation |
| 10.7 | 3.2 | 3.3 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.6 | 3.1 | 3.4 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.5 | -2.9 | -3.6 | SRP105064 | SRR5469591 | High-resolution gene expression datasets of ontogenetic zones in the root apical meristem |
| 10.5 | -1.7 | -6.0 | SRP090458 | SRR4295856 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 10.4 | -3.3 | -3.1 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 10.4 | -1.9 | -5.4 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.4 | 3.4 | 3.0 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.4 | -3.1 | -3.4 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.3 | 3.3 | 3.1 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 10.3 | -2.9 | -3.6 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | 3.5 | 2.9 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.2 | -3.2 | -3.2 | SRP249854 | SRR11103165 | A dynamic pattern of local auxin sources is required for root regeneration |
The preparation time of this page was 0.7 [sec].
