CoexViewer

Coexpression detail for AT4G40070 and AT2G36090
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT4G40070 RING/U-box superfamily protein 830170 At4g40070 0.26 4.21 3.09 4.19 78.50 2.71 3.46 -0.14 0.25 2.62 2.86
ath AT2G36090 F-box family protein 818182 At2g36090 0.26
Platform:

coex z = 3.0864



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830170
(z-scored expression)		 818182
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
20.0 -5.6 -3.6 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
19.1 -4.4 -4.4 SRP100064 SRR5263055 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
18.6 -5.1 -3.7 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
16.3 -4.7 -3.5 SRP187381 SRR8662371 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
16.1 -2.6 -6.2 SRP132865 SRR6726417 Molecular basis of flowering under natural long-day conditions in Arabidopsis
15.8 -3.6 -4.4 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
15.6 -3.5 -4.5 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.5 -3.8 -4.1 SRP267137 SRR12005758 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
13.7 -4.7 -2.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.7 -3.4 -4.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.6 -4.2 -3.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
12.9 -3.8 -3.4 SRP158306 SRR7694979 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.2 -3.4 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -4.2 -2.8 SRP214585 SRR9681479 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.7 2.6 4.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.7 -3.2 -3.3 SRP073485 SRR3401789 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.4 2.9 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 -4.5 -2.3 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.3 -7.0 -1.5 SRP102178 SRR5360849 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 -3.5 -2.9 SRP070918 SRR3193406 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.2 -3.5 -2.9 SRP070918 SRR3193471 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
Note: Samples whose contribution is more than 10 are outputted.



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