CoexViewer
Coexpression detail for CYP84A4 and TBL37
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | CYP84A4 | Cytochrome P450 superfamily protein | 830312 | At5g04330 | 0.24 | 3.50 | 2.92 | 3.13 | 793.90 | 2.39 | 1.82 | 2.56 | 1.53 | 0.86 | 0.25 | |
| ath | TBL37 | TRICHOME BIREFRINGENCE-LIKE 37 | 817968 | At2g34070 | 0.24 |
|
coex z = 2.9201 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 830312 (z-scored expression) |
817968 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.0 | -4.4 | -5.4 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.7 | -4.6 | -3.6 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.8 | -4.6 | -3.2 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.4 | -4.0 | -3.6 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 14.3 | -2.9 | -5.0 | SRP097877 | SRR5205613 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 13.7 | 3.9 | 3.6 | SRP091641 | SRR4426597 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.7 | 3.2 | 4.3 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 13.2 | -4.6 | -2.9 | SRP233656 | SRR10555748 | Arabidopsis QUANTIREX |
| 13.0 | 3.4 | 3.9 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.4 | 3.3 | 3.7 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 12.4 | 3.5 | 3.5 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 12.2 | 3.5 | 3.4 | SRP091641 | SRR4426608 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.0 | 2.3 | 5.2 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.6 | 2.5 | 4.6 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.4 | 2.8 | 4.1 | SRP114806 | SRR5894654 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.1 | 2.6 | 4.2 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.1 | -6.7 | -1.7 | SRP100064 | SRR5263044 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 10.7 | 4.4 | 2.4 | SRP266133 | SRR11934683 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.6 | -3.2 | -3.3 | SRP361288 | SRR18124820 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 10.4 | -2.6 | -3.9 | SRP238084 | SRR10733480 | Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells] |
| 10.2 | -3.1 | -3.3 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 10.2 | -3.5 | -2.9 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | -4.1 | -2.5 | SRP285119 | SRR12698776 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
| 10.1 | -3.8 | -2.7 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.0 | -3.6 | -2.7 | SRP277946 | SRR12469640 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
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