CoexViewer

Coexpression detail for AT5G08139 and AT2G17030
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G08139 RING/U-box superfamily protein 830709 At5g08139 0.51 7.51 5.96 7.01 35.90 2.35 1.67 1.25 2.91 3.21 6.96
ath AT2G17030 F-box SKIP23-like protein (DUF295) 816206 At2g17030 0.51
Platform:

coex z = 5.963



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830709
(z-scored expression)		 816206
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
32.0 -5.4 -6.0 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
31.8 -6.4 -5.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.3 -5.0 -5.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.5 -4.8 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.5 4.3 4.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.5 -4.1 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.0 3.8 4.5 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
16.8 -4.4 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.2 -3.8 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.9 -2.9 -5.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.6 -3.8 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -3.9 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.4 -4.2 -3.4 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
13.9 3.7 3.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.1 -4.1 -3.2 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.8 -3.7 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.3 -4.5 -2.7 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
12.1 -3.5 -3.5 SRP105272 SRR5482538 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
12.0 3.5 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.9 -3.6 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.9 -3.0 -3.9 ERP118109 ERR3624434 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.8 3.2 3.7 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.8 -3.3 -3.6 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 -3.5 -3.3 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.5 3.6 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.4 3.2 3.6 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.8 2.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.0 -3.0 -3.6 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.9 -3.4 -3.2 ERP115370 ERR3333436 Arabidopsis tissue atlas
10.9 -3.3 -3.3 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.9 -5.4 -2.0 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.8 -3.3 -3.3 SRP103736 SRR5440891 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.8 -3.9 -2.8 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.7 2.9 3.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.7 -3.4 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.7 -2.9 -3.7 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 -3.7 -2.9 SRP090913 SRR8185440 WallOmics
10.5 3.1 3.4 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.4 -3.1 -3.4 SRP103736 SRR5440873 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 3.1 3.4 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.3 3.6 2.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 3.6 2.8 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.2 -3.4 -3.0 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -3.0 -3.4 ERP115370 ERR3333439 Arabidopsis tissue atlas
10.1 -2.5 -4.1 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.1 2.8 3.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -2.4 -4.3 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.1 3.8 2.6 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.0 -3.0 -3.4 SRP073485 SRR3401789 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
Note: Samples whose contribution is more than 10 are outputted.



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