CoexViewer

Coexpression detail for AT5G10020 and AT5G12850
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G10020 Leucine-rich receptor-like protein kinase family protein 830865 At5g10020 0.71 6.12 5.58 5.00 171.70 1.29 2.55 3.01 0.74 2.72 4.76
ath AT5G12850 CCCH-type zinc finger protein with ARM repeat domain-containing protein 831125 At5g12850 0.71
Platform:

coex z = 5.5806



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830865
(z-scored expression)		 831125
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
38.0 -5.6 -6.8 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
37.2 -5.7 -6.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
31.3 -4.9 -6.3 ERP115370 ERR3333443 Arabidopsis tissue atlas
29.4 -5.3 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.3 -4.8 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.3 -4.5 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.1 -3.8 -5.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.8 4.2 4.5 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.2 3.7 4.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.6 4.1 3.8 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
14.6 -3.5 -4.2 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
14.4 -4.4 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.8 -3.4 -4.0 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 3.7 3.7 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 3.3 4.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 -4.1 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.5 3.5 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.3 -3.4 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.3 -3.8 -3.5 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
12.5 3.3 3.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.3 -2.9 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.2 -3.2 -3.8 SRP132865 SRR6726417 Molecular basis of flowering under natural long-day conditions in Arabidopsis
12.0 -3.0 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.0 -3.6 -3.3 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.0 -3.6 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.0 3.4 3.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -3.7 -3.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.8 -3.4 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 3.3 3.5 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 3.6 3.3 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 2.9 4.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 3.2 3.6 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 3.3 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 3.3 3.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.2 3.0 3.7 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.2 -3.0 -3.8 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.0 -3.5 -3.2 SRP103736 SRR5440789 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.9 3.4 3.3 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.4 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -2.8 -3.9 SRP214585 SRR9681416 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.8 3.3 3.3 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.6 -2.9 -3.7 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.6 3.3 3.2 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.5 3.4 3.1 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.3 -3.2 SRP311610 SRR14028823 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.5 -3.5 -3.0 SRP214585 SRR9681569 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.5 -2.7 -3.8 SRP220476 SRR10072739 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.3 3.2 3.3 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.3 -2.5 -4.1 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
10.2 3.2 3.2 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.2 -3.2 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.2 2.6 3.9 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 3.2 3.2 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.2 -3.2 -3.2 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.0 -3.1 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.0 -3.2 -3.1 SRP132865 SRR6726416 Molecular basis of flowering under natural long-day conditions in Arabidopsis
10.0 -3.1 -3.2 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
Note: Samples whose contribution is more than 10 are outputted.



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