CoexViewer

Coexpression detail for AT5G12410 and AT2G33840
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT5G12410 THUMP domain-containing protein 831116 At5g12410 0.69 5.88 5.81 3.16
ath AT2G33840 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 817952 At2g33840 0.69
Platform:

coex z = 5.8133



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831116
(z-scored expression)		 817952
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
38.4 -6.2 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.2 -5.3 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.1 -5.2 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.9 4.7 4.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
19.3 -4.7 -4.1 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
18.6 -5.0 -3.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.3 -4.8 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.4 -4.1 -4.2 SRP105272 SRR5482536 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
16.9 -3.8 -4.4 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
16.6 -4.0 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.6 -3.3 -5.1 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
16.5 -3.7 -4.5 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.2 -4.0 -4.1 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
16.1 -4.0 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.8 -4.2 -3.8 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
15.8 -3.7 -4.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
15.4 -4.8 -3.2 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
15.0 -4.2 -3.6 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.1 -3.1 -4.5 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.6 -3.6 -3.8 SRP157719 SRR7688900 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
13.6 3.9 3.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.8 -4.5 -2.8 ERP118109 ERR3624432 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.8 -3.6 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.7 -4.8 -2.7 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
12.5 3.6 3.5 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.9 -3.7 -3.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.9 3.5 3.4 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.7 -3.7 -3.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.7 -4.8 -2.4 ERP115370 ERR3333443 Arabidopsis tissue atlas
11.7 3.5 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.6 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.6 -3.3 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.5 3.3 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.3 -3.4 -3.3 ERP013651 ERR1194832 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
11.0 -4.0 -2.8 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 -3.4 -3.2 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.6 3.5 3.1 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.6 -2.7 -3.9 ERP116123 ERR3414881 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.5 -3.3 -3.2 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.4 -3.2 -3.3 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.4 -3.2 -3.2 SRP097877 SRR5205613 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 -3.3 -3.1 SRP272650 SRR12272425 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.3 -3.5 -3.0 ERP116123 ERR3414884 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
Note: Samples whose contribution is more than 10 are outputted.



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