CoexViewer

Coexpression detail for AT5G12410 and IMB1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G12410 THUMP domain-containing protein 831116 At5g12410 0.69 8.36 9.39 5.08 71.70 3.56 3.29 1.84 2.26 0.61 5.79
ath IMB1 Transcription factor GTE6 818055 At2g34900 0.69
Platform:

coex z = 9.3883



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831116
(z-scored expression)		 818055
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
41.0 -6.2 -6.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.1 -5.3 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.5 -5.0 -4.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
23.3 -5.2 -4.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.6 -4.8 -4.5 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
20.9 -4.8 -4.4 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
20.5 -4.7 -4.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
19.8 -4.8 -4.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
15.9 -4.0 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.3 -3.7 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
15.3 4.1 3.8 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
15.3 4.7 3.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.2 3.9 3.9 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
15.1 -4.0 -3.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.3 -3.0 -4.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.9 -4.0 -3.5 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
13.7 -3.6 -3.8 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.6 -4.2 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.4 -4.0 -3.4 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.7 -4.2 -3.0 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
12.2 -3.4 -3.6 SRP066432 SRR2925730 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
12.1 3.6 3.4 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
12.1 3.4 3.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 -4.8 -2.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.0 -2.4 -5.0 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.0 -3.8 -3.1 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.0 -2.3 -5.2 SRP101274 SRR5308791 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.8 3.5 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.8 3.5 3.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.7 -3.7 -3.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.6 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.6 3.5 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.5 3.4 3.4 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.5 3.3 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.5 -3.2 -3.6 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
11.5 -3.3 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.4 -3.4 -3.4 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.3 3.5 3.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.3 -3.6 -3.1 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
11.1 -2.7 -4.1 SRP148699 SRR7204075 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.9 -3.6 -3.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 3.0 3.6 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.6 3.2 3.3 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.4 3.3 3.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.7 -2.8 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.4 -3.4 -3.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.3 -3.5 -2.9 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.2 -2.9 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.4 -2.9 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.1 3.1 3.3 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 -2.7 -3.8 SRP371011 SRR18808259 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.0 -3.3 -3.1 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.0 -3.4 -2.9 ERP109739 ERR2683774 Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Note: Samples whose contribution is more than 10 are outputted.



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