CoexViewer

Coexpression detail for AT5G12410 and DDL
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G12410 THUMP domain-containing protein 831116 At5g12410 0.69 8.25 6.83 7.44 1361.80 1.95 2.09 1.91 1.14 0.69 5.52
ath DDL SMAD/FHA domain-containing protein 821601 At3g20550 0.69
Platform:

coex z = 6.8276



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831116
(z-scored expression)		 821601
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
39.7 -6.2 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.7 -5.3 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.4 -5.2 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
24.0 -5.0 -4.8 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
23.1 -4.8 -4.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
21.5 -4.8 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.4 -4.8 -4.3 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
19.8 -4.7 -4.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
17.9 4.7 3.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.1 -4.0 -4.3 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.5 -3.7 -4.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.3 -4.0 -4.1 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
16.3 -4.0 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.9 -4.2 -3.8 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
15.7 4.1 3.9 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
15.6 -4.0 -4.0 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
15.4 -3.7 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
15.0 -3.3 -4.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
14.4 -3.7 -4.0 SRP073379 SRR3393591 Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
14.2 -4.2 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.1 3.9 3.6 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.6 -3.2 -4.3 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.6 -3.5 -3.6 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 -3.7 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.5 3.4 3.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.2 3.4 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.1 -3.6 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 3.5 3.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.9 3.5 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.8 3.4 3.5 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 -3.3 -3.6 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.7 -3.4 -3.4 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.6 3.5 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 3.3 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.5 -2.1 -5.4 SRP158306 SRR7694803 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
11.4 -3.7 -3.1 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.3 -3.2 -3.6 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
11.1 -3.4 -3.2 SRP066432 SRR2925730 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
10.7 -3.5 -3.0 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.7 -3.3 -3.3 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 -3.5 -3.1 ERP116123 ERR3414884 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.6 -3.4 -3.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.3 -3.2 -3.3 SRP117360 SRR6030903 The Arabidopsis transcription factor TCP5 during petal and inflorescence development
10.1 -4.7 -2.2 SRP086629 SRR4175056 A global view of RNA-protein interactions reveals novel root hair cell fate regulators
10.1 -3.1 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.1 3.0 3.4 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 2.8 3.6 SRP051513 SRR1734308 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.7 [sec].