CoexViewer

Coexpression detail for AT5G12410 and AT5G66820
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G12410 THUMP domain-containing protein 831116 At5g12410 0.69 4.70 4.77 3.35 392.90 0.96 1.59 1.27 1.83 0.10 1.67
ath AT5G66820 uncharacterized protein 836816 At5g66820 0.69
Platform:

coex z = 4.7658



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831116
(z-scored expression)		 836816
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.0 -6.2 -5.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.9 -4.8 -6.3 ERP115370 ERR3333443 Arabidopsis tissue atlas
26.8 -5.2 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
25.7 -5.3 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.8 -4.8 -4.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
21.9 -4.8 -4.6 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
21.6 -5.0 -4.3 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
19.5 -4.8 -4.1 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
19.2 -4.7 -4.1 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
16.9 -4.2 -4.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
16.6 4.7 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.1 -3.6 -4.5 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
16.0 4.1 3.9 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
15.7 -4.0 -3.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.4 -3.7 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.8 -4.0 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -4.0 -3.7 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
14.6 -4.0 -3.7 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.3 -3.7 -3.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.9 3.3 4.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -3.7 -3.7 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.2 -4.5 -2.9 ERP118109 ERR3624432 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.7 -3.7 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.7 3.5 3.7 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
12.4 -3.3 -3.7 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.3 3.5 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.1 -3.3 -3.7 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.1 -3.6 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.1 3.5 3.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
12.0 3.9 3.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.0 -3.3 -3.7 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.9 3.5 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.8 -3.4 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.7 2.7 4.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -4.7 -2.5 SRP086629 SRR4175056 A global view of RNA-protein interactions reveals novel root hair cell fate regulators
11.6 3.3 3.5 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.5 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.4 -3.5 -3.2 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.3 -3.2 -3.6 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.1 -3.2 -3.5 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
11.1 -3.4 -3.2 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
11.0 -3.2 -3.5 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.9 -3.2 -3.4 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.9 -3.6 -3.0 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.9 -3.0 -3.6 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.6 3.0 3.5 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -2.9 -3.7 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.5 3.3 3.2 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -2.7 -3.8 SRP091641 SRR4426941 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -3.4 -3.0 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.2 2.7 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.3 -3.1 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.0 3.0 3.4 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 2.8 3.6 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -2.4 -4.2 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
Note: Samples whose contribution is more than 10 are outputted.



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