CoexViewer

Coexpression detail for AT5G12410 and AT1G15810
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G12410 THUMP domain-containing protein 831116 At5g12410 0.69 5.92 5.07 5.18 39.20 1.93 1.86 2.93 5.25 2.17 4.26
ath AT1G15810 S15/NS1, RNA-binding protein 838150 At1g15810 0.69
Platform:

coex z = 5.0651



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831116
(z-scored expression)		 838150
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.7 -6.2 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.0 -5.3 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.5 -4.8 -5.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
23.2 4.7 5.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
20.2 -5.2 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.9 -5.0 -3.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.1 -4.8 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.4 -4.0 -4.4 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
16.5 3.9 4.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
15.7 -4.0 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.7 -4.0 -4.0 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
14.8 -3.7 -4.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
14.6 -4.0 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.4 -4.7 -3.0 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.9 -4.0 -3.5 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.5 -3.7 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.4 -3.6 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.3 -3.7 -3.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.3 3.5 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.2 -2.5 -5.2 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.8 -2.3 -5.6 SRP070918 SRR3193311 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
12.2 3.5 3.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
12.1 3.5 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.1 -3.6 -3.4 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.1 -4.2 -2.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -3.4 -3.4 ERP109739 ERR2683774 Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
11.7 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 -2.5 -4.6 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.2 -3.3 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.9 -3.4 -3.2 SRP372716 SRR18963423 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
10.9 -4.0 -2.7 SRP083970 SRR4115362 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.9 -2.7 -4.1 SRP371011 SRR18808259 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.9 -3.4 -3.2 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.9 3.5 3.1 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.8 -3.3 -3.3 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -2.8 -3.8 SRP100064 SRR5263011 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.6 3.4 3.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.1 -3.4 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.6 4.1 2.6 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.5 -3.3 -3.2 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.5 -3.7 -2.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.5 3.1 3.3 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.4 -3.1 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.2 -3.6 -2.8 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.1 -3.2 -3.1 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
Note: Samples whose contribution is more than 10 are outputted.



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