CoexViewer

Coexpression detail for SR1 and MYB3
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath SR1 serine/threonine protein kinase 1 831765 At5g01820 0.89 5.82 5.63 4.43 6.90 2.48 4.58 2.94 3.46 2.61 3.32
ath MYB3 myb domain protein 3 838870 At1g22640 0.89
Platform:

coex z = 5.6304



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 831765
(z-scored expression)		 838870
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.5 -5.7 -5.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.3 -5.3 -5.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
23.2 4.7 5.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
19.2 4.5 4.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.8 -4.0 -4.5 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
16.3 -2.6 -6.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.7 2.5 5.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.7 -4.0 -3.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.4 3.6 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.1 2.4 5.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.9 -4.3 -3.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
12.8 -4.2 -3.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.5 -3.6 -3.4 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.5 -2.7 -4.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 3.0 3.9 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.2 3.4 3.3 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 3.1 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.8 3.3 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.8 -3.0 -3.6 SRP105064 SRR5469591 High-resolution gene expression datasets of ontogenetic zones in the root apical meristem
10.7 -2.5 -4.2 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.7 -3.2 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.7 3.1 3.4 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 3.1 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.2 -3.3 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.6 3.2 3.3 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 2.8 3.8 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.3 -2.6 -3.9 SRP105272 SRR5482546 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
10.2 3.0 3.5 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.1 -3.0 -3.4 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.1 -2.9 -3.5 SRP100064 SRR5263030 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
Note: Samples whose contribution is more than 10 are outputted.



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