CoexViewer
Coexpression detail for AT5G02230 and SR1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT5G02230 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | 831784 | At5g02230 | 0.6 | 5.03 | 4.53 | 4.16 | 2.50 | 2.80 | 3.77 | 4.48 | 4.59 | 2.67 | 4.26 | |
| ath | SR1 | serine/threonine protein kinase 1 | 831765 | At5g01820 | 0.6 |
|
coex z = 4.533 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 831784 (z-scored expression) |
831765 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 27.5 | -5.2 | -5.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 23.5 | -4.1 | -5.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 22.9 | 4.1 | 5.6 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 22.0 | -5.1 | -4.3 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 20.0 | 4.4 | 4.5 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 19.2 | 4.1 | 4.7 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 18.2 | -4.6 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.0 | -3.5 | -4.0 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 13.7 | 4.6 | 3.0 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 11.7 | 3.4 | 3.4 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.6 | 3.4 | 3.1 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.5 | -3.4 | -3.1 | SRP126872 | SRR6381404 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.4 | -3.5 | -3.0 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
The preparation time of this page was 0.7 [sec].
