CoexViewer

Coexpression detail for AT5G19440 and TSBtype2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G19440 NAD(P)-binding Rossmann-fold superfamily protein 832064 At5g19440 0.9 5.83 4.53 5.54 7.60 2.25 3.09 3.57 4.12 0.67 2.31
ath TSBtype2 tryptophan synthase beta type 2 833841 At5g38530 0.9
Platform:

coex z = 4.533



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 832064
(z-scored expression)		 833841
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.6 -6.1 -5.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.7 -5.2 -5.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.6 4.8 5.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.1 -4.1 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.2 3.5 5.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.1 -4.3 -4.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.0 4.1 4.1 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
16.7 -4.3 -3.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.3 3.9 4.2 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 -4.1 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
14.1 -3.6 -3.9 SRP101641 SRR5330626 Chloroplast signalling gates thermotolerance in Arabidopsis
13.9 3.4 4.1 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
13.8 3.7 3.7 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.7 2.5 5.6 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.6 -3.7 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.0 -3.7 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.7 3.4 3.7 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.3 -3.5 -3.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.3 -3.2 -3.8 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.0 -3.5 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 -3.9 -3.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 3.1 3.8 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 -2.4 -4.7 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.0 -2.9 -3.9 SRP101274 SRR5308791 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.9 3.3 3.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.8 2.9 3.7 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.8 2.4 4.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.6 3.0 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
10.8 -2.8 -3.8 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 -3.5 -3.0 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.3 -2.5 -4.1 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -3.3 -3.1 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.1 2.9 3.5 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.1 -3.0 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.0 3.7 2.7 SRP056607 SRR1942867 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
Note: Samples whose contribution is more than 10 are outputted.



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