CoexViewer
Coexpression detail for SPX1 and AT1G23140
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | SPX1 | SPX domain-containing protein 1 | 832137 | At5g20150 | 0.59 | 9.13 | 7.63 | 8.16 | 34.30 | 1.99 | 1.53 | 4.44 | 0.41 | 0.56 | 1.28 | |
| ath | AT1G23140 | Calcium-dependent lipid-binding (CaLB domain) family protein | 838922 | At1g23140 | 0.59 |
|
coex z = 7.6258 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 832137 (z-scored expression) |
838922 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 23.1 | -3.3 | -7.0 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 19.8 | 5.9 | 3.3 | SRP277946 | SRR12469768 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.8 | -3.8 | -4.4 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 16.0 | 3.9 | 4.1 | SRP151817 | SRR7465450 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 15.8 | 5.2 | 3.1 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.8 | 6.2 | 2.5 | SRP277946 | SRR12469766 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.8 | -2.5 | -6.2 | SRP154323 | SRR7536205 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI] |
| 15.2 | -4.9 | -3.1 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 15.1 | 5.3 | 2.8 | SRP277946 | SRR12469767 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.0 | -3.6 | -4.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 13.0 | -2.7 | -4.8 | SRP126872 | SRR6381404 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 12.6 | 6.0 | 2.1 | SRP277946 | SRR12469770 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.4 | 3.6 | 3.5 | SRP151817 | SRR7465414 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 11.5 | -4.1 | -2.8 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 11.0 | 5.8 | 1.9 | SRP277946 | SRR12469769 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.6 | -3.1 | -3.4 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.5 | 4.9 | 2.1 | SRP277946 | SRR12469639 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.4 | -3.7 | -2.8 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.2 | -3.8 | -2.7 | SRP103736 | SRR5440873 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 10.2 | 3.3 | 3.1 | SRP095347 | SRR5120428 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.2 | 3.6 | 2.9 | SRP267998 | SRR12054321 | RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis |
| 10.1 | -2.9 | -3.4 | SRP158306 | SRR7695186 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
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