CoexViewer
Coexpression detail for SPX1 and PS2
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | SPX1 | SPX domain-containing protein 1 | 832137 | At5g20150 | 0.59 | 11.25 | 9.79 | 9.67 | 5.50 | 2.18 | 2.40 | 5.16 | 1.68 | -0.53 | 4.87 | |
| ath | PS2 | inorganic pyrophosphatase 1 | 843632 | At1g73010 | 0.59 |
|
coex z = 9.7874 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 832137 (z-scored expression) |
843632 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 25.2 | 6.2 | 4.0 | SRP277946 | SRR12469766 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 24.6 | 6.0 | 4.1 | SRP277946 | SRR12469770 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 24.5 | 5.9 | 4.1 | SRP277946 | SRR12469768 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 24.0 | 5.8 | 4.2 | SRP277946 | SRR12469769 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 23.9 | 5.3 | 4.5 | SRP277946 | SRR12469767 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 23.0 | 5.2 | 4.4 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 18.8 | -4.9 | -3.8 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.3 | 4.9 | 3.3 | SRP277946 | SRR12469639 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.1 | -3.3 | -4.6 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.8 | 3.9 | 3.8 | SRP151817 | SRR7465450 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 14.2 | -3.1 | -4.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.3 | 3.6 | 3.7 | SRP151817 | SRR7465414 | Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana |
| 12.4 | 3.9 | 3.1 | SRP277946 | SRR12469643 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.9 | -3.2 | -3.8 | SRP051763 | SRR1744383 | Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data) |
| 11.4 | -3.6 | -3.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.7 | -2.9 | -3.6 | SRP158306 | SRR7695186 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
| 10.4 | 3.1 | 3.3 | SRP315323 | SRR14272429 | Agrobacterium VirE2 Protein Modulates Plant Gene Expression and Mediates Transformation from Its Location in the Cytoplasm |
| 10.3 | -3.1 | -3.3 | SRP051513 | SRR1734319 | Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids |
| 10.2 | 3.2 | 3.2 | ERP115136 | ERR3310294 | RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h) |
The preparation time of this page was 0.9 [sec].
