CoexViewer
Coexpression detail for CRR42 and AT5G24165
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | CRR42 | DUF3148 family protein | 832218 | At5g20935 | 0.21 | 5.20 | 4.35 | 4.64 | 22.60 | 1.16 | 2.25 | 4.21 | 4.38 | 1.61 | 2.68 | |
| ath | AT5G24165 | uncharacterized protein | 832483 | At5g24165 | 0.21 |
|
coex z = 4.3501 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 832218 (z-scored expression) |
832483 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 42.5 | -6.2 | -6.8 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.1 | -5.3 | -4.7 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 22.6 | 5.0 | 4.5 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 22.4 | 4.3 | 5.2 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 21.3 | 4.7 | 4.5 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 20.8 | -4.3 | -4.8 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 17.7 | -4.8 | -3.7 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 15.6 | -4.8 | -3.3 | ERP116123 | ERR3414884 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 15.4 | 3.2 | 4.8 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.9 | 3.4 | 4.4 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.8 | -5.3 | -2.8 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.5 | -5.5 | -2.6 | SRP083970 | SRR4115362 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 13.9 | -3.1 | -4.5 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 13.9 | 3.5 | 4.0 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 13.8 | -5.3 | -2.6 | SRP091641 | SRR4426941 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.5 | -3.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 13.5 | 3.3 | 4.1 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.3 | -4.3 | -3.1 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 12.6 | -3.1 | -4.0 | SRP044776 | SRR1523922 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 12.6 | -4.8 | -2.6 | ERP116123 | ERR3414883 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 12.4 | 3.3 | 3.7 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.3 | -4.8 | -2.6 | SRP018034 | SRR2079784 | Time-course transcriptome of wild-type Arabidopsis leaf |
| 12.3 | -3.5 | -3.5 | SRP361288 | SRR18124820 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.0 | -2.5 | -4.8 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 11.9 | -3.5 | -3.4 | SRP166137 | SRR8078941 | RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana) |
| 11.9 | 3.2 | 3.8 | SRP277946 | SRR12470189 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.8 | -3.1 | -3.8 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.8 | -3.6 | -3.3 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.0 | 2.9 | 3.8 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | -3.0 | -3.6 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.9 | -4.8 | -2.3 | ERP116123 | ERR3414881 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.8 | -3.2 | -3.4 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.6 | -2.8 | -3.8 | SRP272650 | SRR12272429 | Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity |
| 10.3 | 3.0 | 3.5 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.1 | -3.4 | -3.0 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 10.0 | -4.8 | -2.1 | ERP116123 | ERR3414892 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.0 | -3.5 | -2.9 | SRP301115 | SRR13397400 | Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours. |
The preparation time of this page was 1.7 [sec].
