CoexViewer
Coexpression detail for NIT4 and ASPGB1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ath | NIT4 | nitrilase 4 | 832290 | At5g22300 | 0.4 | 4.04 | 3.75 | 3.23 | 263.20 | 0.68 | 2.34 | 2.94 | 1.88 | -0.20 | 5.26 | |
ath | ASPGB1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | 820860 | At3g16150 | 0.4 |
coex z = 3.7515 |
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Sample contribution score* | 832290 (z-scored expression) |
820860 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
---|---|---|---|---|---|
27.7 | 5.4 | 5.1 | SRP279501 | SRR12558734 | Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration |
21.9 | 4.7 | 4.7 | SRP056601 | SRR1947749 | Arabidopsis thaliana Transcriptome or Gene expression |
21.9 | 4.7 | 4.7 | SRP057258 | SRR1976486 | BCAA catabolic mutants in prolonged darkness |
20.8 | 4.9 | 4.3 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
17.3 | -3.2 | -5.3 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
16.4 | 4.4 | 3.7 | SRP114806 | SRR5894660 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
15.8 | -3.9 | -4.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
15.1 | -3.5 | -4.3 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
14.6 | 4.1 | 3.6 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
13.2 | -4.3 | -3.0 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
12.4 | 4.2 | 2.9 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
11.5 | 4.4 | 2.6 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
11.2 | -3.6 | -3.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
11.1 | 3.5 | 3.2 | SRP114806 | SRR5894639 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
10.8 | -2.6 | -4.1 | SRP093913 | SRR5054306 | Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis |
10.8 | 4.1 | 2.6 | SRP091641 | SRR4426765 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
10.5 | -3.8 | -2.8 | SRP093972 | SRR5057790 | Transcriptome analysis after ectopically expressing REV in SAM epidermis |
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