CoexViewer

Coexpression detail for RAD23D and AT3G20800
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath RAD23D Rad23 UV excision repair protein family 833835 At5g38470 0.92 5.11 5.07 3.77 1982.60 0.89 0.38 1.47 1.54 -1.09 3.15
ath AT3G20800 Cell differentiation, Rcd1-like protein 821628 At3g20800 0.92
Platform:

coex z = 5.0651



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 833835
(z-scored expression)		 821628
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
42.4 -6.8 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.5 5.5 5.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
25.9 -5.7 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.3 5.4 4.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
24.2 -4.8 -5.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
21.6 -5.5 -3.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.7 -3.8 -4.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.4 -4.2 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.4 -3.5 -4.9 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.2 -4.1 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.0 -4.2 -3.8 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
15.9 4.5 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.4 3.7 4.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
15.2 4.6 3.3 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.4 -3.6 -4.0 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
14.4 -3.7 -3.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.0 3.7 3.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
13.7 3.8 3.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 4.1 3.3 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.3 -3.6 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.2 3.8 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
13.1 -3.1 -4.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.0 3.6 3.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
13.0 -3.5 -3.7 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
12.9 3.7 3.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.9 -3.7 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.8 4.0 3.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 -3.9 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.4 -4.2 -2.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.4 3.8 3.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 -2.9 -4.1 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.9 -3.3 -3.6 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.9 -3.1 -3.9 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.8 -3.1 -3.8 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.3 3.4 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.1 3.2 3.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
11.1 -3.7 -3.0 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
11.1 -2.5 -4.4 ERP116123 ERR3414706 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.0 -3.7 -2.9 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.9 -3.7 -2.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.9 3.5 3.1 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -3.3 -3.3 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.7 -3.3 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 -1.7 -6.1 SRP132865 SRR6726416 Molecular basis of flowering under natural long-day conditions in Arabidopsis
10.6 2.7 4.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.6 -3.6 -2.9 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.5 3.9 2.7 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 3.3 3.1 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.4 3.5 3.0 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 3.1 3.4 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 3.1 3.3 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.1 -3.3 SRP101344 SRR5311364 HOP family plays a major role in long term acquired thermotolerance in Arabidopsis affecting the HSR and protein QC
10.2 3.2 3.2 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.4 -3.0 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.1 3.4 3.0 SRP371011 SRR18808229 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.1 -4.0 -2.5 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
Note: Samples whose contribution is more than 10 are outputted.



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