CoexViewer

Coexpression detail for BIM3 and AT5G45760
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath BIM3 BES1-interacting Myc-like protein 3 833877 At5g38860 0.36 5.89 6.26 0.91
ath AT5G45760 Transducin/WD40 repeat-like superfamily protein 834615 At5g45760 0.36
Platform:

coex z = 6.2623



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 833877
(z-scored expression)		 834615
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
27.6 -5.8 -4.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
27.3 -5.3 -5.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
24.6 -4.5 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
23.0 -4.6 -5.0 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.3 -5.0 -3.6 SRP103736 SRR5440873 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
17.4 -4.3 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.6 -3.8 -4.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.6 -3.5 -4.4 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.9 -3.8 -3.9 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
14.5 -3.8 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.8 -3.6 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.8 -6.0 -2.3 SRP361288 SRR18124799 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.5 -2.7 -5.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.1 -3.3 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.9 -6.1 -2.1 SRP132865 SRR6726416 Molecular basis of flowering under natural long-day conditions in Arabidopsis
12.8 -3.5 -3.6 SRP191093 SRR8859571 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
12.4 -3.3 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.3 -3.8 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.3 -2.2 -5.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.2 -2.1 -5.7 SRP267137 SRR12005730 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.1 -3.9 -3.1 SRP108336 SRR5631409 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
12.0 -3.2 -3.8 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.8 -3.2 -3.7 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.7 -3.0 -3.9 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.2 -3.8 -2.9 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.1 -2.9 -3.8 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -2.7 -4.0 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 -3.2 -3.4 SRP150217 SRR7289547 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 -3.6 -2.9 SRP238084 SRR10733479 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
10.5 3.3 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 -3.6 -2.9 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
10.3 -2.8 -3.7 SRP234996 SRR10603562 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.2 -3.2 -3.2 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
10.1 -2.2 -4.6 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
Note: Samples whose contribution is more than 10 are outputted.



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